Abstract: The vertebrate mitochondrial genomes generally present a typical gene order. Exceptions are uncommon and important to study the genetic mechanisms of gene order rearrangements and their consequences on phylogenetic output and mitochondrial function. Antarctic notothenioid fish carry some peculiar rearrangements of the mitochondrial gene order. In this first systematic study of 28 species, we analyzed known and undescribed mitochondrial genome rearrangements for a total of eight different gene orders within the notothenioid fish. Our reconstructions suggest that transpositions, duplications, and inversion of multiple genes are the most likely mechanisms of rearrangement in notothenioid mitochondrial genomes. In Trematominae, we documented an extremely rare inversion of a large genomic segment of 5,300 bp that partially affected the gene compositional bias but not the phylogenetic output. The genomic region delimited by nad5 and trnF, close to the area of the Control Region, was identified as the hot spot of variation in Antarctic fish mitochondrial genomes. Analyzing the sequence of several intergenic spacers and mapping the arrangements on a newly generated phylogeny showed that the entire history of the Antarctic notothenioids is characterized by multiple, relatively rapid, events of disruption of the gene order. We hypothesized that a pre-existing genomic flexibility of the ancestor of the Antarctic notothenioids may have generated a precondition for gene order rearrangement, and the pressure of purifying selection could have worked for a rapid restoration of the mitochondrial functionality and compactness after each event of rearrangement.

Abstract: Electronic tracking technologies revolutionized wildlife ecology, notably for studying the movements of elusive species such as seabirds. Those advances are key to seabird conservation, for example in guiding the design of marine protected areas for this highly threatened group. Tracking data are also boosting scientific understanding of marine ecosystem dynamics in the context of global change. To optimize future tracking efforts, we performed a global assessment of seabird tracking data. We identified and mined 689 seabird tracking studies, reporting on > 28,000 individuals of 216 species from 17 families over the last four decades. We found substantial knowledge gaps, reflecting a historical neglect of tropical seabird ecology, with biases toward species that are heavier, oceanic, and from high-latitude regions. Conservation status had little influence on seabird tracking propensity. We identified 54 threatened species for which we did not find published tracking records, and 19 with very little data. Additionally, much of the existing tracking data are not yet available to other researchers and decision-makers in online databases. We highlight priority species and regions for future tracking efforts. More broadly, we provide guidance toward an ethical, rational, and efficient global tracking program for seabirds, as a contribution to their conservation.

Abstract: Light-absorbing carbonaceous aerosols emitted by biomass or fossil fuel combustion can contribute to amplifying Arctic climate warming by lowering the albedo of snow. The Svalbard archipelago, being near to Europe and Russia, is particularly affected by these pollutants, and improved knowledge of their distribution in snow is needed to assess their impact. Here we present and synthesize new data obtained on Svalbard between 2007 and 2018, comprising measurements of elemental (EC) and water-insoluble organic carbon (WIOC) in snow from 37 separate sites. We used these data, combined with meteorological data and snowpack modeling, to investigate the variability of EC and WIOC deposition in Svalbard snow across latitude, longitude, elevation and time. Overall, EC concentrations (CsnowEC) ranged from <1.0 to 266.6 ng g−1, while WIOC concentrations (CsnowWIOC) ranged from <1 to 9426 ng g−1, with the highest values observed near Ny-Ålesund. Calculated snowpack loadings (LsnowEC, LsnowWIOC) on glaciers surveyed in spring 2016 were 0.1 to 2.6 mg m−2 and 2 to 173 mg m−2, respectively. The median CsnowEC and the LsnowEC on those glaciers were close to or lower than those found in earlier (2007–2009), comparable surveys. Both LsnowEC and LsnowWIOC increased with elevation and snow accumulation, with dry deposition likely playing a minor role. Estimated area-averaged snowpack loads across Svalbard were 1.1 mg EC m−2 and 38.3 mg WIOC m−2 for the 2015–2016 winter. An ∼11-year long dataset of spring surface snow measurements from the central Brøgger Peninsula was used to quantify the interannual variability of EC and WIOC deposition in snow. In most years, CsnowEC and CsnowWIOC at Ny-Ålesund (50 m a.s.l.) were 2–5 times higher than on the nearby Austre Brøggerbreen glacier (456 m a.s.l.), and the median EC/WIOC in Ny-Ålesund was 6 times higher, suggesting a possible influence of local EC emission from Ny-Ålesund. While no long-term trends between 2011 and 2018 were found, CsnowEC and CsnowWIOC showed synchronous variations at Ny-Ålesund and Austre Brøggerbreen. When compared with data from other circum-Arctic sites obtained by comparable methods, the median CsnowEC on Svalbard falls between that found in central Greenland (lowest) and those in continental sectors of European Arctic (northern Scandinavia, Russia and Siberia; highest), which is consistent with large-scale patterns of BC in snow reported by surveys based on other methods.

Abstract: Most of the microbial biogeographic patterns in the oceans have been depicted at the whole community level, leaving out finer taxonomic resolution (i.e., microdiversity) that is crucial to conduct intra-population phylogeographic study, as commonly done for macroorganisms. Here, we present a new approach to unravel the bacterial phylogeographic patterns combining community-wide survey by 16S rRNA gene metabarcoding and intra-species resolution through the oligotyping method, allowing robust estimations of genetic and phylogeographic indices, and migration parameters. As a proof-of-concept, we focused on the bacterial genus Spirochaeta across three distant biogeographic provinces of the Southern Ocean; maritime Antarctica, sub-Antarctic Islands, and Patagonia. Each targeted Spirochaeta operational taxonomic units were characterized by a substantial intrapopulation microdiversity, and significant genetic differentiation and phylogeographic structure among the three provinces. Gene flow estimations among Spirochaeta populations support the role of the Antarctic Polar Front as a biogeographic barrier to bacterial dispersal between Antarctic and sub-Antarctic provinces. Conversely, the Antarctic Circumpolar Current appears as the main driver of gene flow, connecting sub-Antarctic Islands with Patagonia and maritime Antarctica. Additionally, historical processes (drift and dispersal limitation) govern up to 86% of the spatial turnover among Spirochaeta populations. Overall, our approach bridges the gap between microbial and macrobial ecology by revealing strong congruency with macroorganisms distribution patterns at the populational level, shaped by the same oceanographic structures and ecological processes.

Abstract: Aim Here, we aim to: (a) investigate the local effect of environmental and anthropogenic factors on alien plant invasion in sub-Antarctic islands; and (b) explore whether and how functional traits affect alien species dependence on anthropogenic factors in these environments. Location Possession Island, Crozet archipelago (French sub-Antarctic islands). Methods Single-species distribution models were used to explore the effect of high-resolution topoclimatic and human-related variables on the occurrence of six alien plants colonizing French sub-Antarctic islands. Furthermore, plant responses to human-related variables and the effect of those variables in interaction with plant traits were analysed by means of a multi-species distribution model. This allowed identifying functional features mediating the influence of human activities on the occurrence probability of alien plant species. Results We observed two main invasion patterns: (a) species predicted to occur close to the introduction sites, whose occurrence probability appeared to be strongly affected by anthropogenic factors; and (b) species predicted to occur nearly everywhere on Possession Island, except in areas featuring particularly harsh climatic conditions. Differences in the influence of human-related variables on the occurrence of the alien species were mostly related to their life history, plant height and residence time, with perennial and low-statured species introduced earlier appearing less dependent on human-induced dispersal and disturbance. Conclusions We conclude that both topoclimatic and anthropogenic factors affect plant invasion on sub-Antarctic islands. Specifically, species predicted to occur close to their introduction sites appear much more dependent on human presence and activity, potentially due to the lack of key functional traits allowing them to spread successfully across Possession Island under the harsh sub-Antarctic climate. Yet, particularly severe abiotic conditions are a major constraint which equally limits the occurrence of all alien plants, irrespective of their dependence on anthropogenic factors.