Abstract: Over evolutionary time, pathogen challenge shapes the immune phenotype of the host to better respond to an incipient threat. The extent and direction of this selection pressure depend on the local pathogen composition, which is in turn determined by biotic and abiotic features of the environment. However, little is known about adaptation to local pathogen threats in wild animals. The Gentoo penguin (Pygoscelis papua) is a species complex that lends itself to the study of immune adaptation because of its circumpolar distribution over a large latitudinal range, with little or no admixture between different clades. In this study, we examine the diversity in a key family of innate immune genes—the Toll-like receptors (TLRs)—across the range of the Gentoo penguin. The three TLRs that we investigated present varying levels of diversity, with TLR4 and TLR5 greatly exceeding the diversity of TLR7. We present evidence of positive selection in TLR4 and TLR5, which points to pathogen-driven adaptation to the local pathogen milieu. Finally, we demonstrate that two positively selected cosegregating sites in TLR5 are sufficient to alter the responsiveness of the receptor to its bacterial ligand, flagellin. Taken together, these results suggest that Gentoo penguins have experienced distinct pathogen-driven selection pressures in different environments, which may be important given the role of the Gentoo penguin as a sentinel species in some of the world’s most rapidly changing environments.

Abstract: High juvenile mortality rates are typical of many long-lived marine vertebrate predators. Insufficient development in dive and forage ability is considered a key driver of this. However, direct links to survival outcome are sparse, particularly in free-ranging marine animals that may not return to land. In this study, we conduct exploratory investigations toward early mortality in juvenile southern elephant seals Mirounga leonina. Twenty postweaning pups were equipped with (a) a new-generation satellite relay data tag, capable of remotely transmitting fine-scale behavioral movements from accelerometers, and (b) a location transmitting only tag (so that mortality events could be distinguished from device failures). Individuals were followed during their first trip at sea (until mortality or return to land). Two analyses were conducted. First, the behavioral movements and encountered environmental conditions of nonsurviving pups were individually compared to temporally concurrent observations from grouped survivors. Second, common causes of mortality were investigated using Cox's proportional hazard regression and penalized shrinkage techniques. Nine individuals died (two females and seven males) and 11 survived (eight females and three males). All but one individual died before the return phase of their first trip at sea, and all but one were negatively buoyant. Causes of death were variable, although common factors included increased horizontal travel speeds and distances, decreased development in dive and forage ability, and habitat type visited (lower sea surface temperatures and decreased total [eddy] kinetic energy). For long-lived marine vertebrate predators, such as the southern elephant seal, the first few months of life following independence represent a critical period, when small deviations in behavior from the norm appear sufficient to increase mortality risk. Survival rates may subsequently be particularly vulnerable to changes in climate and environment, which will have concomitant consequences on the demography and dynamics of populations.

Abstract: The astonishing variety of sounds that birds can produce has been the subject of many studies aiming to identify the underlying anatomical and physical mechanisms of sound production. An interesting feature of some bird vocalisations is the simultaneous production of two different frequencies. While most work has been focusing on songbirds, much less is known about dual-sound production in non-passerines, although their sound production organ, the syrinx, would technically allow many of them to produce “two voices”. Here, we focus on the king penguin, a colonial seabird whose calls consist of two fundamental frequency bands and their respective harmonics. The calls are produced during courtship and for partner and offspring reunions and encode the birds’ identity. We dissected, μCT-scanned and analysed the vocal tracts of six adult king penguins from Possession Island, Crozet Archipelago.

Abstract: Seabirds from remote regions are mainly exposed to environmental contaminants from non-point contamination of their food webs. Pre-fledging seabird chicks are fed by their parents with marine prey captured in the vicinity of breeding colonies. Contaminant concentrations in tissues of pre-fledging chicks can thus be mostly related to local dietary sources, and have the potential to unravel spatial patterns of environmental contamination in marine ecosystems. Here, mercury (Hg), 13 other trace elements, and 18 persistent organic pollutants (POPs) were quantified in blood of chicks across four breeding locations that encompass a large latitudinal range in the southern Indian Ocean (from Antarctica, through subantarctic areas, to the subtropics), over a single breeding season. Thirteen species of penguins, albatrosses and petrels were studied, including endangered and near-threatened species, such as Amsterdam albatrosses and emperor penguins. Blood Hg burdens varied widely between species, with a factor of ~50 between the lowest and highest concentrations (mean ± SD, 0.05 ± 0.01 and 2.66 ± 0.81 µg g−1 dry weight, in thin-billed prions and Amsterdam albatrosses, respectively). Species relying on Antarctic waters for feeding had low Hg exposure. Concentrations of POPs were low in chicks, with the exception of hexachlorobenzene. Contaminant concentrations were mainly explained by species differences, but feeding habitat (inferred from δ13C values) and chicks’ body mass also contributed to explain variation. Collectively, our findings call for further toxicological investigations in Amsterdam albatrosses and small petrel species, because they were exposed to high and diverse sources of contaminants, and in macaroni penguins, which specifically showed very high selenium concentrations. Capsule Seabird chicks from four distant sites in the southern Indian Ocean had contrasted blood metallic and organic contaminant patterns depending on species, feeding habitat and body mass.

Abstract: The ionospheric electron population is divided into two groups. The ambient electrons are thermalized. Their energy is usually smaller than one electron volt. Their densities and temperatures are the usual ones measured by incoherent scatter radars, or modeled by international codes such as International Reference Ionosphere (IRI). There is however a second population called the suprathermal electrons. This one is either due to photoionization or to electron impact between the thermosphere and the precipitation in the high latitude zone. In the frame of space weather, it may be the source of scintillations, plasma bulks and other physical phenomena. The suprathermal electron population can only indirectly be measured through the plasmaline and had never been modeled. Its modeling requires the computation of the electron stationary flux by solving the Boltzmann transport equation. This flux is multiplied by various powers of the velocity v and integrated to obtain the different order moments. By integrating f over v0dv, one deduces the suprathermal electron density. An integration of v1fdv allows the computation of their mean velocity. Higher moments give access to their temperature and finally to their heat flux. In this work, we demonstrate for the first time the full and rigorous calculation of the ionospheric electron moments up to three. As two case studies, we focus on high latitude in the auroral oval and low magnetic latitude over Algiers for different solar and geophysical conditions. We compare the suprathermal densities and temperatures to the thermal electron parameters. Our results highlight that – as expected – the suprathermal density is small compared to the thermal one. Although it is close to 3 × 103 m−3 at 180 km during the day, it drops drastically at night, to hardly reach 3 m−3. Contrarily to the density, the velocity is about 10 times more important during the nighttime when precipitation occurs than during the daytime under the electromagnetic solar flux. At 400 km, it varies during the day between 700,000 m s−1 (active solar conditions) and 900,000 m s−1 (quiet Sun). At night, the velocity varies between 3 × 106 m s−1 (low mean energy precipitation) and 3 × 107 m s−1 (high mean energy precipitation) at 400 km. The suprathermal temperature increases as the solar activity decreases or as the mean energy of the electron precipitation increases. It may reach values close to 3 × 108 K. The heat flux may be fully oriented downward or experiences a reversal with some flux going up depending on the forcing.