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Author |
Audrey Jaeger, Amandine Gamble, Erwan Lagadec, Camille Lebarbenchon, Vincent Bourret, Jérémy Tornos, Christophe Barbraud, Karin Lemberger, Karine Delord, Henri Weimerskirch, Jean-Baptiste Thiebot, Thierry Boulinier, Pablo Tortosa |
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Title |
Impact of Annual Bacterial Epizootics on Albatross Population on a Remote Island |
Type |
Journal |
| |
Year |
2020 |
Publication |
EcoHealth |
Abbreviated Journal |
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| |
Volume |
17 |
Issue |
2 |
Pages |
194-202 |
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Keywords |
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Abstract |
The reduced species richness typical of oceanic islands provides an interesting environmental setup to examine in natura the epidemiological dynamics of infectious agents with potential implications for public health and/or conservation. On Amsterdam Island (Indian Ocean), recurrent die-offs of Indian yellow-nosed albatross (Thalassarche carteri) nestlings have been attributed to avian cholera, caused by the bacterium Pasteurella multocida. In order to help implementing efficient measures for the control of this disease, it is critical to better understand the local epidemiology of P. multocida and to examine its inter- and intra-annual infection dynamics. We evaluated the infection status of 264 yellow-nosed albatrosses over four successive breeding seasons using a real-time PCR targeting P. multocida DNA from cloacal swabs. Infection prevalence patterns revealed an intense circulation of P. multocida throughout the survey, with a steady but variable increase in infection prevalence within each breeding season. These epizootics were associated with massive nestling dies-offs, inducing very low fledging successes (≤ 20%). These results suggest important variations in the transmission dynamics of this pathogen. These findings and the developed PCR protocol have direct applications to guide future research and refine conservation plans aiming at controlling the disease. |
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Programme  |
109, 1151 |
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Bachelor's thesis |
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ISSN |
1612-9210 |
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Notes |
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Approved |
yes |
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Call Number |
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Serial |
7961 |
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Author |
Yan Ropert-Coudert, Anton P. Van de Putte, Ryan R. Reisinger, Horst Bornemann, Jean-Benoît Charrassin, Daniel P. Costa, Bruno Danis, Luis A. Hückstädt, Ian D. Jonsen, Mary-Anne Lea, David Thompson, Leigh G. Torres, Philip N. Trathan, Simon Wotherspoon, David G. Ainley, Rachael Alderman, Virginia Andrews-Goff, Ben Arthur, Grant Ballard, John Bengtson, Marthán N. Bester, Arnoldus Schytte Blix, Lars Boehme, Charles-André Bost, Peter Boveng, Jaimie Cleeland, Rochelle Constantine, Robert J. M. Crawford, Luciano Dalla Rosa, P. J. Nico de Bruyn, Karine Delord, Sébastien Descamps, Mike Double, Louise Emmerson, Mike Fedak, Ari Friedlaender, Nick Gales, Mike Goebel, Kimberly T. Goetz, Christophe Guinet, Simon D. Goldsworthy, Rob Harcourt, Jefferson T. Hinke, Kerstin Jerosch, Akiko Kato, Knowles R. Kerry, Roger Kirkwood, Gerald L. Kooyman, Kit M. Kovacs, Kieran Lawton, Andrew D. Lowther, Christian Lydersen, Phil O’B Lyver, Azwianewi B. Makhado, Maria E. I. Márquez, Birgitte I. McDonald, Clive R. McMahon, Monica Muelbert, Dominik Nachtsheim, Keith W. Nicholls, Erling S. Nordøy, Silvia Olmastroni, Richard A. Phillips, Pierre Pistorius, Joachim Plötz, Klemens Pütz, Norman Ratcliffe, Peter G. Ryan, Mercedes Santos, Colin Southwell, Iain Staniland, Akinori Takahashi, Arnaud Tarroux, Wayne Trivelpiece, Ewan Wakefield, Henri Weimerskirch, Barbara Wienecke, José C. Xavier, Ben Raymond, Mark A. Hindell |
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Title |
The retrospective analysis of Antarctic tracking data project |
Type |
Journal |
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Year |
2020 |
Publication |
Scientific Data |
Abbreviated Journal |
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Volume |
7 |
Issue |
1 |
Pages |
94 |
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Keywords |
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Abstract |
The Retrospective Analysis of Antarctic Tracking Data (RAATD) is a Scientific Committee for Antarctic Research project led jointly by the Expert Groups on Birds and Marine Mammals and Antarctic Biodiversity Informatics, and endorsed by the Commission for the Conservation of Antarctic Marine Living Resources. RAATD consolidated tracking data for multiple species of Antarctic meso- and top-predators to identify Areas of Ecological Significance. These datasets and accompanying syntheses provide a greater understanding of fundamental ecosystem processes in the Southern Ocean, support modelling of predator distributions under future climate scenarios and create inputs that can be incorporated into decision making processes by management authorities. In this data paper, we present the compiled tracking data from research groups that have worked in the Antarctic since the 1990s. The data are publicly available through biodiversity.aq and the Ocean Biogeographic Information System. The archive includes tracking data from over 70 contributors across 12 national Antarctic programs, and includes data from 17 predator species, 4060 individual animals, and over 2.9 million observed locations. |
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Programme |
109,1091,1201 |
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Thesis |
Bachelor's thesis |
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Summary Language |
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Abbreviated Series Title |
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Edition |
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ISSN |
2052-4463 |
ISBN |
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Notes |
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Approved |
yes |
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Call Number |
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Serial |
7691 |
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| Permanent link to this record |
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Author |
Amandine Gamble, Romain Bazire, Karine Delord, Christophe Barbraud, Audrey Jaeger, Hubert Gantelet, Eric Thibault, Camille Lebarbenchon, Erwan Lagadec, Pablo Tortosa, Henri Weimerskirch, Jean-Baptiste Thiebot, Romain Garnier, Jérémy Tornos, Thierry Boulinier |
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Title |
Predator and scavenger movements among and within endangered seabird colonies: Opportunities for pathogen spread |
Type |
Journal |
| |
Year |
2020 |
Publication |
Journal of Applied Ecology |
Abbreviated Journal |
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| |
Volume |
57 |
Issue |
2 |
Pages |
367-378 |
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Keywords |
conservation biology disease ecology dynamic space utilization individual heterogeneity movement ecology Pasteurella multocida sentinel species serology |
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Abstract |
The spatial structure of host communities is expected to constrain pathogen spread. However, predators and/or scavengers may connect distant host (sub)populations when foraging. Determining whether some individuals or populations play a prominent role in the spread of pathogens is critical to inform management measures. We explored movements and epidemiological status of brown skuas Stercorarius antarcticus, the only avian terrestrial consumer native of Amsterdam Island (Indian Ocean), to assess whether and how they could be involved in the spread of the bacterium Pasteurella multocida, which recurrently causes avian cholera outbreaks in endangered albatross and penguin species breeding on the island. High proportions of seropositive and DNA-positive individuals for P. multocida indicated that skuas are highly exposed to the pathogen and may be able to transmit it. Movement tracking revealed that the foraging ranges of breeding skuas largely overlap among individuals and expand all along the coasts where albatrosses and penguins nest, but not on the inland plateau hosting the endemic Amsterdam albatross Diomedea amsterdamensis. Considering the epidemiological and movement data, skua movements may provide opportunity for pathogen spread among and within seabird colonies. Synthesis and applications. This work highlights the importance of considering the behaviour and epidemiological status of predators and scavengers in disease dynamics because the foraging movements of individuals of such species can potentially limit the efficiency of local management measures in spatially structured host communities. Such species could thus represent priority vaccination targets to implement efficient management measures aiming at limiting pathogen spread and also be used as sentinels to monitor pathogen circulation and evaluate the effectiveness of management measures. |
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Programme |
109,1151 |
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Thesis |
Bachelor's thesis |
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Language |
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Summary Language |
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Original Title |
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Series Editor |
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Series Title |
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Abbreviated Series Title |
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Series Volume |
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Series Issue |
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Edition |
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ISSN |
1365-2664 |
ISBN |
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Medium |
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Area |
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Expedition |
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Conference |
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Notes |
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Approved |
yes |
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Call Number |
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Serial |
7683 |
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| Permanent link to this record |
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Author |
Sam L. Cox, Matthieu Authier, Florian Orgeret, Henri Weimerskirch, Christophe Guinet |
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Title |
High mortality rates in a juvenile free-ranging marine predator and links to dive and forage ability |
Type |
Journal |
| |
Year |
2020 |
Publication |
Ecology and Evolution |
Abbreviated Journal |
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Volume |
10 |
Issue |
1 |
Pages |
410-430 |
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Keywords |
bio-logging early life foraging ecology juvenile mortality Mirounga leonina southern elephant seal survival analyses |
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Abstract |
High juvenile mortality rates are typical of many long-lived marine vertebrate predators. Insufficient development in dive and forage ability is considered a key driver of this. However, direct links to survival outcome are sparse, particularly in free-ranging marine animals that may not return to land. In this study, we conduct exploratory investigations toward early mortality in juvenile southern elephant seals Mirounga leonina. Twenty postweaning pups were equipped with (a) a new-generation satellite relay data tag, capable of remotely transmitting fine-scale behavioral movements from accelerometers, and (b) a location transmitting only tag (so that mortality events could be distinguished from device failures). Individuals were followed during their first trip at sea (until mortality or return to land). Two analyses were conducted. First, the behavioral movements and encountered environmental conditions of nonsurviving pups were individually compared to temporally concurrent observations from grouped survivors. Second, common causes of mortality were investigated using Cox's proportional hazard regression and penalized shrinkage techniques. Nine individuals died (two females and seven males) and 11 survived (eight females and three males). All but one individual died before the return phase of their first trip at sea, and all but one were negatively buoyant. Causes of death were variable, although common factors included increased horizontal travel speeds and distances, decreased development in dive and forage ability, and habitat type visited (lower sea surface temperatures and decreased total [eddy] kinetic energy). For long-lived marine vertebrate predators, such as the southern elephant seal, the first few months of life following independence represent a critical period, when small deviations in behavior from the norm appear sufficient to increase mortality risk. Survival rates may subsequently be particularly vulnerable to changes in climate and environment, which will have concomitant consequences on the demography and dynamics of populations. |
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Programme |
109,1201 |
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Address |
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Corporate Author |
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Thesis |
Bachelor's thesis |
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Summary Language |
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Original Title |
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Series Editor |
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Series Title |
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Abbreviated Series Title |
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Series Volume |
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Series Issue |
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Edition |
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ISSN |
2045-7758 |
ISBN |
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Area |
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Expedition |
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Conference |
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Notes |
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Approved |
yes |
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Call Number |
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Serial |
7667 |
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| Permanent link to this record |
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Author |
D. B. Green, S. Bestley, R. Trebilco, S. P. Corney, P. Lehodey, C. R. McMahon, C. Guinet, Mark A. Hindell |
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Title |
Modelled mid-trophic pelagic prey fields improve understanding of marine predator foraging behaviour |
Type |
Journal |
| |
Year |
2020 |
Publication |
Ecography |
Abbreviated Journal |
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| |
Volume |
43 |
Issue |
7 |
Pages |
1014-1026 |
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Keywords |
ecosystem modelling kerguelen plateau micronekton predators prey interaction southern elephant seal Southern Indian Ocean |
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Abstract |
Biophysical interactions are influential in determining the scale of key ecological processes within marine ecosystems. For oceanic predators, this means foraging behaviour is influenced by processes shaping the distribution of prey. However, oceanic prey is difficult to observe and its abundance and distribution is regionally generalised. We use a spatiotemporally resolved simulation model to describe mid-trophic prey distribution within the Southern Ocean and demonstrate insights that this modelled prey field provides into the foraging behaviour of a widely distributed marine predator, the southern elephant seal. From a five-year simulation of prey biomass, we computed climatologies of mean prey biomass (average prey conditions) and prey biomass variability (meso-scale variability). We also compiled spatially gridded metrics of seal density and diving behaviour from 13 yr of tracking data. We statistically modelled these metrics as non-linear functions of prey biomass (both mean and variability) and used these to predict seal distribution and behaviour. Our predictions were consistent with observations (R2adj = 0.23), indicating that seals aggregate in regions of high mesoscale activity where eddies concentrate prey. Here, seals dived deeper (R2marg = 0.12, R2cond = 0.51) and spent less time hunting (R2marg = 0.05, R2cond = 0.56), likely targeting deep but profitable prey patches. Seals generally avoided areas of low eddy activity where prey was likely dispersed. Most seals foraged south of the Subantarctic Front, despite north of the front exhibiting consistently high simulated prey biomasses. This likely reflects seal prey or habitat preferences, but also emphasises the importance of mesoscale prey biomass variability relative to regionally high mean biomass. This work demonstrates the value of coupling mechanistic representations of prey biomass with predator observations to provide insight into how biophysical processes combine to shape species distributions. This will be increasingly important for the robust prediction of species’ responses to rapid system change. |
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Programme |
109,1201 |
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Campaign |
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Address |
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Corporate Author |
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Thesis |
Bachelor's thesis |
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Publisher |
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Place of Publication |
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Editor |
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Language |
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Summary Language |
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Original Title |
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Series Editor |
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Series Title |
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Abbreviated Series Title |
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Series Volume |
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Series Issue |
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Edition |
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ISSN |
1600-0587 |
ISBN |
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Medium |
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Area |
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Expedition |
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Conference |
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Notes |
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Approved |
yes |
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Call Number |
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Serial |
7688 |
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| Permanent link to this record |
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Author |
Julie Mestre, Matthieu Authier, Yves Cherel, Rob Harcourt, Clive R. McMahon, Mark A. Hindell, Jean-Benoît Charrassin, Christophe Guinet |
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Title |
Decadal changes in blood δ13C values, at-sea distribution, and weaning mass of southern elephant seals from Kerguelen Islands |
Type |
Journal |
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Year |
2020 |
Publication |
Proceedings of the Royal Society B: Biological Sciences |
Abbreviated Journal |
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Volume |
287 |
Issue |
1933 |
Pages |
20201544 |
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Keywords |
bio-logging decadal change foraging habitat Indian sector of the Southern Ocean population strategies stable isotopes |
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Abstract |
Changes in the foraging environment and at-sea distribution of southern elephant seals from Kerguelen Islands were investigated over a decade (2004–2018) using tracking, weaning mass, and blood δ13C values. Females showed either a sub-Antarctic or an Antarctic foraging strategy, and no significant shift in their at-sea distribution was detected between 2004 and 2017. The proportion of females foraging in sub-Antarctic versus Antarctic habitats did not change over the 2006–2018 period. Pup weaning mass varied according to the foraging habitat of their mothers. The weaning mass of sub-Antarctic foraging mothers' pups decreased by 11.7 kg over the study period, but they were on average 5.8 kg heavier than pups from Antarctic foraging mothers. Pup blood δ13C values decreased by 1.1‰ over the study period regardless of their sex and the presumed foraging habitat of their mothers. Together, these results suggest an ecological change is occurring within the Indian sector of the Southern Ocean with possible consequences on the foraging performance of southern elephant seals. We hypothesize that this shift in δ13C is related to a change in primary production and/or in the composition of phytoplankton communities, but this requires further multidisciplinary investigations. |
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Programme |
109,1201 |
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Campaign |
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Address |
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Corporate Author |
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Thesis |
Bachelor's thesis |
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Publisher |
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Place of Publication |
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Editor |
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Language |
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Summary Language |
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Original Title |
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Series Editor |
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Series Title |
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Abbreviated Series Title |
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Series Volume |
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Series Issue |
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Edition |
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ISSN |
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ISBN |
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Medium |
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Area |
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Expedition |
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Conference |
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Notes |
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Approved |
yes |
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Call Number |
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Serial |
8006 |
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| Permanent link to this record |
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Author |
Lia Siegelman, Patrice Klein, Pascal Rivière, Andrew F. Thompson, Hector S. Torres, Mar Flexas, Dimitris Menemenlis |
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Title |
Enhanced upward heat transport at deep submesoscale ocean fronts |
Type |
Journal |
| |
Year |
2020 |
Publication |
Nature Geoscience |
Abbreviated Journal |
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Volume |
13 |
Issue |
1 |
Pages |
50-55 |
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Keywords |
Physical oceanography |
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Abstract |
The ocean is the largest solar energy collector on Earth. The amount of heat it can store is modulated by its complex circulation, which spans a broad range of spatial scales, from metres to thousands of kilometres. In the classical paradigm, fine oceanic scales, less than 20 km in size, are thought to drive a significant downward heat transport from the surface to the ocean interior, which increases oceanic heat uptake. Here we use a combination of satellite and in situ observations in the Antarctic Circumpolar Current to diagnose oceanic vertical heat transport. The results explicitly demonstrate how deep-reaching submesoscale fronts, with a size smaller than 20 km, are generated by mesoscale eddies of size 50–300 km. In contrast to the classical paradigm, these submesoscale fronts are shown to drive an anomalous upward heat transport from the ocean interior back to the surface that is larger than other contributions to vertical heat transport and of comparable magnitude to air–sea fluxes. This effect can remarkably alter the oceanic heat uptake and will be strongest in eddy-rich regions, such as the Antarctic Circumpolar Current, the Kuroshio Extension and the Gulf Stream, all of which are key players in the climate system. |
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Programme |
109,1201 |
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Address |
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Corporate Author |
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Thesis |
Bachelor's thesis |
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Publisher |
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Place of Publication |
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Editor |
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Language |
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Summary Language |
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Original Title |
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Series Editor |
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Series Title |
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Abbreviated Series Title |
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Series Volume |
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Series Issue |
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Edition |
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ISSN |
1752-0908 |
ISBN |
1752-0908 |
Medium |
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Area |
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Expedition |
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Conference |
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Notes |
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Approved |
yes |
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Call Number |
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Serial |
8264 |
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| Permanent link to this record |
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Author |
Christophe Barbraud, Karine Delord, Charles A. Bost, Adrien Chaigne, Cédric Marteau, Henri Weimerskirch |
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Title |
Population trends of penguins in the French Southern Territories |
Type |
Journal |
| |
Year |
2020 |
Publication |
Polar Biology |
Abbreviated Journal |
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Volume |
43 |
Issue |
7 |
Pages |
835-850 |
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Keywords |
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Abstract |
Penguins are important top consumers in marine food webs and are one of the most threatened bird families, especially by climate change and food web alterations by marine fisheries. Yet, long-term population trends are lacking or are uncertain for many populations. Seven species of penguins breeding at the French Southern Territories in the southern Indian Ocean on the Crozet, Kerguelen, Saint-Paul–Amsterdam archipelagos and in Terre Adélie/Adelie Land, Antarctica are monitored regularly. This monitoring started in the early 1950s and most populations have been surveyed during the past four years, allowing assessments of population trends. King penguins increased at nearly all breeding sites within the Crozet and Kerguelen archipelagos. Emperor penguins have decreased at Terre Adélie/Adelie Land, with a partial recovery of the colony during the 2010s. Gentoo penguin populations at Crozet and Kerguelen are highly variable but stable. Adélie penguins have been increasing in Terre Adélie/Adelie Land. The trends in eastern rockhopper penguins vary between colonies and archipelagos. Northern rockhopper penguins have continuously decreased in numbers at Amsterdam Island, but appear to have increased at the nearby Saint-Paul Island. Macaroni penguins have first increased and then stabilized since the 2000s at Kerguelen and are stable at the Crozet Islands. Overall, most penguin populations breeding in the French Southern Territories increased or were stable over the past 30–60 years, with the exception of the northern rockhopper penguin, king and gentoo penguins on Crozet and the emperor penguin. The ecological reasons for these trends are poorly understood and require further investigation. |
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Programme |
109,394 |
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Campaign |
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Address |
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Corporate Author |
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Thesis |
Bachelor's thesis |
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Publisher |
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Place of Publication |
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Editor |
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Language |
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Summary Language |
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Original Title |
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Series Editor |
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Series Title |
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Abbreviated Series Title |
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Series Volume |
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Series Issue |
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Edition |
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ISSN |
1432-2056 |
ISBN |
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Medium |
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Area |
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Expedition |
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Conference |
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Notes |
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Approved |
yes |
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Call Number |
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Serial |
7639 |
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| Permanent link to this record |
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Author |
Aymeric. Fromant, C. M. Miskelly, J. P. Y. Arnould, C.-A. Bost |
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Title |
Artificial burrows as a tool for long-term studies of diving petrels |
Type |
Journal |
| |
Year |
2020 |
Publication |
Polar Biology |
Abbreviated Journal |
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Volume |
43 |
Issue |
5 |
Pages |
435-442 |
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Keywords |
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Abstract |
Long-term studies are essential to determine demographic parameters and population trends in seabirds. However, studies to date have focused mainly on the larger and accessible species. While small seabirds (< 200 g) play a major role in marine ecosystems, their nesting habitat, which is typically fragile convoluted burrows, largely preclude long-term surveys. This study evaluated the installation of artificial burrows as a tool to facilitate ongoing long-term research on small burrowing seabirds. We tested the use and acceptance of artificial burrows during the chick-rearing period of common diving petrels (Pelecanoides urinatrix) on Mayes Island, Kerguelen Archipelago, southern Indian Ocean. The growth rate, mass at fledging and fledging rate of chicks were similar between artificial and natural burrows. Similarly, there was no difference in occupancy rate 1 and 2 years after artificial burrows were installed. The installation of artificial burrows during the chick-rearing period of a small burrowing seabird appears to be an effective way to facilitate ongoing monitoring and research and, therefore, we recommend the wider use of artificial burrows to facilitate monitoring and research of other small burrow-nesting procellariiform species. |
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Programme |
109,394 |
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Campaign |
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Address |
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Corporate Author |
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Thesis |
Bachelor's thesis |
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Publisher |
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Place of Publication |
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Editor |
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Language |
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Summary Language |
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Original Title |
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Series Editor |
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Series Title |
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Abbreviated Series Title |
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Series Volume |
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Series Issue |
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Edition |
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ISSN |
1432-2056 |
ISBN |
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Medium |
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Area |
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Expedition |
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Conference |
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Notes |
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Approved |
yes |
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Call Number |
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Serial |
7658 |
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| Permanent link to this record |
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Author |
C. Michelot, A. Kato, T. Raclot, K. Shiomi, P. Goulet, P. Bustamante, Y. Ropert-Coudert |
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Title |
Sea-ice edge is more important than closer open water access for foraging Adélie penguins: evidence from two colonies |
Type |
Journal |
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Year |
2020 |
Publication |
Marine Ecology Progress Series |
Abbreviated Journal |
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Volume |
640 |
Issue |
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Pages |
215-230 |
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Colony Diet GPS Incubation trip Pygoscelis adeliae Sea-ice edge Stable isotopes |
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Abstract |
Sentinel species, like Adélie penguins, have been used to assess the impact of environmental changes, and their link with sea ice has received considerable attention. Here, we tested if foraging Adélie penguins from 2 colonies in East Antarctica target the distant sea-ice edge or take advantage of closer open waters that are readily available near their colony. We examined the foraging behaviour of penguins during the incubation trips of females in 2016 and males in 2017, using GPS tracking and diet data in view of daily sea-ice data and bathymetry. In 2016-2017, sea-ice cover was extensive during females’ trips but flaw leads and polynyas were close to both study sites. Sea ice receded rapidly during males’ trips in 2017-2018. Despite close open water near both colonies in both years, females and males preferentially targeted the continental slope and the sea-ice edge to forage. In addition, there was no difference in the diet of penguins from both colonies: all penguins fed mostly on Antarctic krill and males also foraged on Antarctic silverfish. Our results highlight the importance of the sea-ice edge for penguins, an area where food abundance is predictable. It is likely that resource availability was not sufficient in closer open water areas at such an early stage in the breeding season. The behaviours displayed by the penguins from both colonies were similar, suggesting a common behaviour across colonies in Terre Adélie, although additional sites would be necessary to confirm this hypothesis. |
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1091 |
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0171-8630, 1616-1599 |
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0171-8630, 1616-1599 |
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yes |
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7680 |
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