Abstract: The vertebrate mitochondrial genomes generally present a typical gene order. Exceptions are uncommon and important to study the genetic mechanisms of gene order rearrangements and their consequences on phylogenetic output and mitochondrial function. Antarctic notothenioid fish carry some peculiar rearrangements of the mitochondrial gene order. In this first systematic study of 28 species, we analyzed known and undescribed mitochondrial genome rearrangements for a total of eight different gene orders within the notothenioid fish. Our reconstructions suggest that transpositions, duplications, and inversion of multiple genes are the most likely mechanisms of rearrangement in notothenioid mitochondrial genomes. In Trematominae, we documented an extremely rare inversion of a large genomic segment of 5,300 bp that partially affected the gene compositional bias but not the phylogenetic output. The genomic region delimited by nad5 and trnF, close to the area of the Control Region, was identified as the hot spot of variation in Antarctic fish mitochondrial genomes. Analyzing the sequence of several intergenic spacers and mapping the arrangements on a newly generated phylogeny showed that the entire history of the Antarctic notothenioids is characterized by multiple, relatively rapid, events of disruption of the gene order. We hypothesized that a pre-existing genomic flexibility of the ancestor of the Antarctic notothenioids may have generated a precondition for gene order rearrangement, and the pressure of purifying selection could have worked for a rapid restoration of the mitochondrial functionality and compactness after each event of rearrangement.

Abstract: Most of the articles of this focus section serve as good examples in the open science domain, in which data are expected to be “findable, accessible, interoperable, and reusable” (Wilkinson et al., 2016). In many contributions, emphasis is placed on quality: as automated access to seismological archives via standardized web services emerges as the preferred user strategy, ensuring the high quality of data and metadata becomes more and more important (e.g., Büyükakpınar et al., 2021; Cambaz et al., 2021; Carrilho et al., 2021; Evangelidis et al., 2021; Mader and Ritter, 2021; Ottemöller et al., 2021; Péquegnat et al., 2021; Stammler et al., 2021; Strollo et al., 2021). Quality is especially important at a time when very large datasets are increasingly being processed routinely and “blindly” in machine‐learning approaches. The vast majority of seismological data centers already manage multisensor archives (seismometers, accelerometers, infrasound, amphibian seismological instruments, high‐rate global navigation satellite systems, etc.), and the inclusion of new types of data (e.g., rotational sensors, low‐cost instrumentation, and synthetic waveforms) in seismological archives poses new challenges and prompts for new technical solutions and standards for data archiving, metadata preparation, quality checks, data dissemination, and processing. A particular challenge over the next few years (Quinteros, Carter, et al., 2021) is the upcoming massive growth of data volume, due in particular to new instruments (large‐N experiments and distributed acoustic sensing systems) but also to increased volumes of traditional seismic data. It is expected that multisensor experiments will progressively dominate the technical and scientific discussion in geosciences in the coming decade, spurred by the societal need to develop multidisciplinary, multihazard science and research products. Joining forces and competences is therefore key to addressing future challenges: the EarthScope Consortium was recently established in the United States, and the European Plate Observing System (EPOS) was created as the framework to integrate all geoscience services in the greater European region. ORFEUS and its seismic network community strongly support the development and consolidation of EPOS by participating in the activities of its thematic core service for seismology.

Abstract: Sea level in the South Atlantic Ocean has only been measured at a small number of tide-gauge locations, which causes considerable uncertainty in 20th-century sea-level trend estimates in this basin. To obtain a better-constrained sea-level trend in the South Atlantic Ocean, this study aims to answer two questions. The first question is: can we combine new observations, vertical land motion estimates, and information on spatial sampling biases to obtain a likely range of 20th-century sea-level rise in the South Atlantic? We combine existing observations with recovered observations from Dakar and a high-resolution sea-level reconstruction based on salt-marsh sediments from the Falkland Islands and find that the rate of sea-level rise in the South Atlantic has likely been between 1.1 and 2.2 mm year−1 (5%–95% confidence intervals), with a central estimate of 1.6 mm year−1. This rate is on the high side, but not statistically different compared to global-mean trends from recent reconstructions. The second question is: are there any physical processes that could explain a large deviation from the global-mean sea-level trend in the South Atlantic? Sterodynamic (changes in ocean dynamics and steric effects) and gravitation, rotation, and deformation effects related to ice mass loss and land water storage have probably led to a 20th-century sea-level trend in the South Atlantic above the global mean. Both observations and physical processes thus suggest that 20th-century sea-level rise in the South Atlantic has been about 0.3 mm year−1 above the rate of global-mean sea-level rise, although even with the additional observations, the uncertainties are still too large to distinguish a statistically significant difference.

Abstract: Global cooling and glacial–interglacial cycles since Antarctica’s isolation have been responsible for the diversification of the region’s marine fauna. By contrast, these same Earth system processes are thought to have played little role terrestrially, other than driving widespread extinctions. Here, we show that on islands along the Antarctic Polar Front, paleoclimatic processes have been key to diversification of one of the world’s most geographically isolated and unique groups of herbivorous beetles—Ectemnorhinini weevils. Combining phylogenomic, phylogenetic, and phylogeographic approaches, we demonstrate that these weevils colonized the sub-Antarctic islands from Africa at least 50 Ma ago and repeatedly dispersed among them. As the climate cooled from the mid-Miocene, diversification of the beetles accelerated, resulting in two species-rich clades. One of these clades specialized to feed on cryptogams, typical of the polar habitats that came to prevail under Miocene conditions yet remarkable as a food source for any beetle. This clade’s most unusual representative is a marine weevil currently undergoing further speciation. The other clade retained the more common weevil habit of feeding on angiosperms, which likely survived glaciation in isolated refugia. Diversification of Ectemnorhinini weevils occurred in synchrony with many other Antarctic radiations, including penguins and notothenioid fishes, and coincided with major environmental changes. Our results thus indicate that geo-climatically driven diversification has progressed similarly for Antarctic marine and terrestrial organisms since the Miocene, potentially constituting a general biodiversity paradigm that should be sought broadly for the region’s taxa.

Abstract: Ocean circulation connects geographically distinct ecosystems across a wide range of spatial and temporal scales via exchanges of physical and biogeochemical properties. Remote oceanographic processes can be especially important for ecosystems in the Southern Ocean, where the Antarctic Circumpolar Current transports properties across ocean basins through both advection and mixing. Recent tracking studies have indicated the existence of two large-scale, open ocean habitats in the Southern Ocean used by grey petrels (Procellaria cinerea) from two populations (i.e., Kerguelen and Antipodes islands) during their nonbreeding season for extended periods during austral summer (i.e., October to February). In this work, we use a novel combination of large-scale oceanographic observations, surface drifter data, satellite-derived primary productivity, numerical adjoint sensitivity experiments, and output from a biogeochemical state estimate to examine local and remote influences on these grey petrel habitats. Our aim is to understand the oceanographic features that control these isolated foraging areas and to evaluate their ecological value as oligotrophic open ocean habitats. We estimate the minimum local primary productivity required to support these populations to be much <1% of the estimated local primary productivity. The region in the southeast Indian Ocean used by the birds from Kerguelen is connected by circulation to the productive Kerguelen shelf. In contrast, the region in the south-central Pacific Ocean used by seabirds from the Antipodes is relatively isolated suggesting it is more influenced by local factors or the cumulative effects of many seasonal cycles. This work exemplifies the potential use of predator distributions and oceanographic data to highlight areas of the open ocean that may be more dynamic and productive than previously thought. Our results highlight the need to consider advective connections between ecosystems in the Southern Ocean and to re-evaluate the ecological relevance of oligotrophic Southern Ocean regions from a conservation perspective.