Abstract: Fisheries modify prey availability for marine predators by extracting resources but also by providing them with new feeding opportunities. Among these, depredation, which occurs when predators feed on fish caught on fishing gear, is a behavior developed by many species as a way to acquire food through limited foraging effort. However, the extent to which depredated resources from fisheries contribute to the energetic requirements and affect the demography of depredating individuals is unknown. We investigated the contribution of Patagonian toothfish Dissostichus eleginoides depredated on longlines to the energetic requirements of killer whales Orcinus orca around the Crozet Islands (southern Indian Ocean) over the period 2007-2018. Our results indicate that during days when depredation occurred, depredating individuals fulfilled on average 94.1% of their daily energetic requirements with depredated toothfish. However, the contribution varied from 1.2 to 13.3% of the monthly energetic requirements and from 2.4 to 8.8% of the yearly energetic requirements of the total population. Together, these findings suggest that intake of depredated toothfish can be substantial at a fine scale (daily and individually), potentially leading to temporary provisioning effects and changes in predation pressures. These effects become minor (<10%), however, when considering the full population over a whole year. The contribution of depredated fish to the annual energetic requirements of the population has increased in recent years, likely due to larger fishing quotas and greater opportunities for whales to depredate, which stresses the importance of accounting for depredation in ecosystem-based management of fishing activity.

Abstract: The accurate prediction of tides is vital for the operation of many industries, early warning of coastal flooding and scientific understanding of ocean processes. In this paper, we describe the creation method of a global dataset of tidal harmonics using NEMO (Nucleus for European Modelling of the Ocean) for the first time and an offline objective analysis scheme. Data are assimilated as part of a post-processing step, reducing the computational resources required. A reduced ensemble of tidal harmonics is generated, where each member is run for a shorter period of time than a central background state. This ensemble is used to estimate a single background covariance state, which is used for analysis. Output is validated using an ensemble of objective analyses. For each ensemble member, random selections of observations are omitted and validation is performed at these locations. Improvements in both Mean Absolute Error (MAE) and correlation coefficients (R2) are seen across all 6 of the largest diurnal and semi-diurnal constituents. MAEs in amplitude and phase are reduced by up to 78% and 89%, respectively, and correlations by as much as 0.14. In addition, the majority of locations (between 70 and 80%) see significant improvement.

Abstract: .La densification du névé en glace est un processus essentiel à comprendre pour interpréter les enregistrements climatiques. Une bonne connaissance des mécanismes permet une datation précise de l'air capturé dans la glace lors de la fermeture des pores. Celle-ci est plus vieille que l'air capturé à cause du transport des gaz dans la colonne de névé plus rapide que la densification de celui-ci. Cette différence d'âge entre la glace et le gaz est généralement appelé le Δage. La densification de la neige consiste en un processus complexe de réarrangement de grains, de frittage et de déformation viscoplastique. Bien que le comportement viscoplastique du cristal de glace soit fortement anisotrope, les modèles de densification actuels ne tiennent pas compte de cette anisotropie. De plus, le caractère granulaire du névé affecte aussi sa densification. La relation entre la fermeture des pores et les mécanismes microstructuraux sous-jacents est encore méconnue. Le but de cette thèse est d'incorporer l'aspect granulaire ainsi que l'anisotropie du cristal de glace dans une approche de modélisation innovante de la densification. Des expériences sur l'indentation viscoplastique de cylindres monocristallins de glace ont été réalisées pour proposer une loi de contact basée sur la théorie de l'indentation, et prenant en compte la déformation préférentielle du cristal de glace sur les plans basaux. Cette loi de contact a été implémentée dans un code utilisant la méthode des éléments discrets pour prédire la densification du névé.La micro-tomographie aux rayons X a été utilisée pour caractériser ex situ le névé polaire en trois dimensions à différentes étapes de la densification (ρ= 0.55-0.88 g/cm3), i.e. pour différentes profondeurs (~23 à 130m). Une étude fine de la fermeture des pores et de différentes caractéristiques morphologiques et physiques a été réalisée pour les sites polaires Dome C et Lock In. Des essais mécaniques ont aussi été réalisés in situ sur du névé extrait de Dome C dans le but de modéliser la densification du névé. Les observations microstructurales des expériences ex situ et in situ révèlent d'importantes différences dues aux vitesses relativement importantes utilisées lors des essais mécaniques. Ces vitesses rapides permettent de découpler la contribution des cinétiques de diffusion de la contribution viscoplastique de la déformation. Les effets de ces contributions sur la morphologie des pores et leurs fermetures sont discutés. Pour caractériser la fermeture des pores, cette thèse propose un indice de connectivité définit par le ratio entre le volume du plus gros pore sur la porosité totale. En effet, cet indice est plus approprié lors de l'utilisation de la tomographie aux rayons X que le ratio de pores fermés pour prédire la densité au close-off.

Abstract: The development of a computationally efficient scheme for predicting the global distribution of total water level (TWL) is discussed. The ocean model is barotropic, has a horizontal grid spacing of 1/12°, and is based on the NEMO modeling framework. It is forced by the gravitational potential and hourly atmospheric fields for 2008. Hourly time spacing was required to resolve the S2 tide in global air pressure and wind. The predicted tide in water deeper than 400 m was nudged to TPXO8 “observations” of tidal elevation or current using a scheme called tidal nudging (Kodaira et al., 2019). The benefit of nudging horizontal velocity in the momentum equation, compared to sea level in the continuity equation, is discussed. Tidal nudging is shown to improve tidal predictions of sea level at the coast, particularly at the S2 tidal frequency. The predicted radiational S2 tide in sea level forced solely by the S2 tide in global air pressure reaches amplitudes exceeding 80 cm. Decreasing the time spacing of the air pressure forcing from 1 h to 3 h reduces the S2 amplitude in air pressure by a factor of 0.82, consistent with expectations based on Fourier analysis. This highlights the importance of using hourly atmospheric forcing when predicting the global sea level response to atmospheric forcing. The radiational S2 tide in sea level is subject to strong nonlinear interaction with the gravitational tide, leading to a pronounced attenuation of the radiational S2 tide. The attenuation is explained by an increase in effective bottom friction at the S2 frequency due to the presence of the gravitational tide. Four schemes for predicting TWL are evaluated to quantify the impact of tidal nudging and nonlinear interaction of tide and surge. Using TWLs observed by 304 coastal tide gauges, we show it is necessary to include both tidal nudging and nonlinear interaction. Plans for the further development of an operational flood forecast system for the Canadian coast, based on the above model, are discussed.

Abstract: The reproductive success of birds is strongly driven by environmental conditions at different time scales. Thus, during periods of low food availability, breeding success is constrained by the ability of adults to adapt their foraging effort and feeding behaviour to maintain regular incubation shifts and chick provisioning. However, while large seabirds can buffer disruptions in prey availability, the ecophysiological constraints of smaller species may limit their behavioural flexibility. By combining information on at-sea movements, foraging habitat, trophic niche, and breeding success, this study evaluated the effects of intense variability in oceanographic conditions on common diving petrels (Pelecanoides urinatrix) at the northern extent of their range in south-eastern Australia during four consecutive breeding seasons. Unusually low breeding success (6 and 0%) was observed during two years with intense heatwave events, which were associated with higher foraging effort (foraging trips twice longer) and a substantial shift in trophic niche (lower blood δ15N values). These findings suggest that common diving petrels in Bass Strait may have reached a critical threshold above which buffering the effects of environmental variability on their reproductive output is not possible. The clear cascading impacts that marine heatwaves have on zooplankton feeders illustrate the profound bottom-up effect induced by such extreme environmental variations, and suggest strong impact on higher-trophic levels. The wide, circumpolar breeding distribution of the common diving petrel, and its high sensitivity to variations in oceanographic conditions, suggest that this species may be a suitable model to study short-term and long-term behavioural responses to the effects of climate change throughout the Southern Ocean.