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Chiara Papetti, Massimiliano Babbucci, Agnes Dettai, Andrea Basso, Magnus Lucassen, Lars Harms, Celine Bonillo, Franz Maximilian Heindler, Tomaso Patarnello, Enrico Negrisolo |
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Title |
Not Frozen in the Ice: Large and Dynamic Rearrangements in the Mitochondrial Genomes of the Antarctic Fish |
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Year |
2021 |
Publication |
Genome Biology and Evolution |
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Volume |
13 |
Issue |
3 |
Pages |
evab017 |
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Abstract |
The vertebrate mitochondrial genomes generally present a typical gene order. Exceptions are uncommon and important to study the genetic mechanisms of gene order rearrangements and their consequences on phylogenetic output and mitochondrial function. Antarctic notothenioid fish carry some peculiar rearrangements of the mitochondrial gene order. In this first systematic study of 28 species, we analyzed known and undescribed mitochondrial genome rearrangements for a total of eight different gene orders within the notothenioid fish. Our reconstructions suggest that transpositions, duplications, and inversion of multiple genes are the most likely mechanisms of rearrangement in notothenioid mitochondrial genomes. In Trematominae, we documented an extremely rare inversion of a large genomic segment of 5,300 bp that partially affected the gene compositional bias but not the phylogenetic output. The genomic region delimited by nad5 and trnF, close to the area of the Control Region, was identified as the hot spot of variation in Antarctic fish mitochondrial genomes. Analyzing the sequence of several intergenic spacers and mapping the arrangements on a newly generated phylogeny showed that the entire history of the Antarctic notothenioids is characterized by multiple, relatively rapid, events of disruption of the gene order. We hypothesized that a pre-existing genomic flexibility of the ancestor of the Antarctic notothenioids may have generated a precondition for gene order rearrangement, and the pressure of purifying selection could have worked for a rapid restoration of the mitochondrial functionality and compactness after each event of rearrangement. |
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1124 |
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1759-6653 |
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yes |
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8235 |
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Karine Sellegri, Alessia Nicosia, Evelyn Freney, Julia Uitz, Melilotus Thyssen, Gérald Grégori, Anja Engel, Birthe Zäncker, Nils Haëntjens, Sébastien Mas, David Picard, Alexia Saint-Macary, Maija Peltola, Clémence Rose, Jonathan Trueblood, Dominique Lefevre, Barbara D’Anna, Karine Desboeufs, Nicholas Meskhidze, Cécile Guieu, Cliff S. Law |
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Title |
Surface ocean microbiota determine cloud precursors |
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Year |
2021 |
Publication |
Scientific Reports |
Abbreviated Journal |
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Volume |
11 |
Issue |
1 |
Pages |
281 |
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Keywords |
Atmospheric science Marine biology |
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Abstract |
One pathway by which the oceans influence climate is via the emission of sea spray that may subsequently influence cloud properties. Sea spray emissions are known to be dependent on atmospheric and oceanic physicochemical parameters, but the potential role of ocean biology on sea spray fluxes remains poorly characterized. Here we show a consistent significant relationship between seawater nanophytoplankton cell abundances and sea-spray derived Cloud Condensation Nuclei (CCN) number fluxes, generated using water from three different oceanic regions. This sensitivity of CCN number fluxes to ocean biology is currently unaccounted for in climate models yet our measurements indicate that it influences fluxes by more than one order of magnitude over the range of phytoplankton investigated. |
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1187 |
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2045-2322 |
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yes |
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7264 |
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Candice Michelot, Akiko Kato, Thierry Raclot, Yan Ropert-Coudert |
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Title |
Adélie penguins foraging consistency and site fidelity are conditioned by breeding status and environmental conditions |
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Year |
2021 |
Publication |
PLOS ONE |
Abbreviated Journal |
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Volume |
16 |
Issue |
1 |
Pages |
e0244298 |
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Keywords |
Animal behavior Animal sexual behavior Animal sociality Birds Foraging Nesting habits Penguins Reproductive success |
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Abstract |
There is a growing interest in studying consistency and site fidelity of individuals to assess, respectively, how individual behaviour shapes the population response to environmental changes, and to highlight the critical habitats needed by species. In Antarctica, the foraging activity of central place foragers like Adélie penguins (Pygoscelis adeliae) is constrained by the sea-ice cover during the breeding season. We estimated the population-level repeatability in foraging trip parameters and sea-ice conditions encountered by birds across successive trips over several years, and we examined their foraging site fidelity linked to sea-ice concentrations throughout the chick-rearing season. Penguins’ foraging activity was repeatable despite varying annual sea-ice conditions. Birds’ site fidelity is constrained by both sea-ice conditions around the colony that limit movements and resources availability, and also behavioural repeatability of individuals driven by phenological constraints. Adélie penguins favoured sea-ice concentrations between 20–30%, as these facilitate access to open water while opening multiple patches for exploration in restricted areas in case of prey depletion. When the sea-ice concentration became greater than 30%, foraging site fidelity decreased and showed higher variability, while it increased again after 60%. Between two trips, the foraging site fidelity remained high when sea-ice concentration changed by ± 10% but showed greater variability when sea-ice concentrations differed on a larger range. In summary, Adélie penguins specialize their foraging behaviour during chick-rearing according to sea-ice conditions to enhance their reproductive success. The balance between being consistent under favourable environmental conditions vs. being flexible under more challenging conditions may be key to improving foraging efficiency and reproductive success to face fast environmental changes. |
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1091 |
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1932-6203 |
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yes |
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6428 |
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Author |
Karl-Ludwig Klein |
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Title |
Radio Astronomical Tools for the Study of Solar Energetic Particles I. Correlations and Diagnostics of Impulsive Acceleration and Particle Propagation |
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Year |
2021 |
Publication |
Frontiers in Astronomy and Space Sciences |
Abbreviated Journal |
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Volume |
7 |
Issue |
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Pages |
105 |
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Abstract |
Solar energetic particles (SEPs) are sporadically ejected from the Sun during flares and coronal mass ejections. They are of major astrophysical interest, because the proximity of the Sun allows for detailed multi-messenger studies. They affect space weather due to interactions with electronics, with the Earth’s atmosphere, and with humans if they leave the protective shield of the magnetosphere of the Earth. Since early studies in the 1950s, starting with particle detectors on the ground, SEP events have been related to radio bursts. Two subjects are addressed in this chapter: attempts to establish quantitative correlations between SEPs and microwave bursts produced by gyro synchrotron radiation of mildly relativistic electrons, and the information derived from type III radio bursts on impulsive processes of particle acceleration and the coronal and interplanetary propagation. Type III radio bursts produced by electron beams on open magnetic field lines have a wide range of applications, including the identification of acceleration regions, the identification of confined particle acceleration with coronal signatures, but no SEPs, and the paths that the electrons, and energetic charged particles in general, take to travel from the low corona to the Heliosphere in case they escape. Simple scenarios of coronal particle acceleration are confirmed in relatively simple and short events. But the comparison with particle transport models shows that longer and delayed acceleration episodes exist especially in large SEP events. They will be discussed in a companion chapter. |
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227 |
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2296-987X |
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yes |
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6775 |
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J. Rojas, J. Duprat, C. Engrand, E. Dartois, L. Delauche, M. Godard, M. Gounelle, J. D. Carrillo-Sánchez, P. Pokorný, J. M. C. Plane |
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Title |
The micrometeorite flux at Dome C (Antarctica), monitoring the accretion of extraterrestrial dust on Earth |
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Year |
2021 |
Publication |
Earth and Planetary Science Letters |
Abbreviated Journal |
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Volume |
560 |
Issue |
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Pages |
116794 |
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Keywords |
Antarctic micrometeorites atmospheric entry cosmic spherules extraterrestrial flux interplanetary dust particles zodiacal cloud |
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Abstract |
The annual flux of extraterrestrial material on Earth is largely dominated by sub-millimetre particles. The mass distribution and absolute value of this cosmic dust flux at the Earth's surface is however still uncertain due to the difficulty in monitoring both the collection efficiency and the exposure parameter (i.e. the area-time product in m2.yr). In this paper, we present results from micrometeorite collections originating from the vicinity of the CONCORDIA Station located at Dome C (Antarctica), where we performed several independent melts of large volumes of ultra-clean snow. The regular precipitation rate and the exceptional cleanliness of the snow from central Antarctica allow a unique control on both the exposure parameter and the collection efficiency. A total of 1280 unmelted micrometeorites (uMMs) and 808 cosmic spherules (CSs) with diameters ranging from 30 to 350 μm were identified. Within that size range, we measured mass fluxes of 3.0 μg.m−2.yr−1 for uMMs and 5.6 μg.m−2.yr−1 for CSs. Extrapolated to the global flux of particles in the 12-700 μm diameter range, the mass flux of dust at Earth's surface is 5,200±12001500 tons.yr−1 (1,600±500 and 3,600±7001000 tons.yr−1 of uMMs and CSs, respectively). We indicate the statistical uncertainties expected for collections with exposure parameters in the range of 0.1 up to 105 m2.yr. In addition, we estimated the flux of altered and unaltered carbon carried by heated and un-heated particles at Earth's surface. The mass distributions of CSs and uMMs larger than 100 μm are fairly well reproduced by the CABMOD-ZoDy model that includes melting and evaporation during atmospheric entry of the interplanetary dust flux. These numerical simulations suggest that most of the uMMs and CSs originate from Jupiter family comets and a minor part from the main asteroid belt. The total dust mass input before atmospheric entry is estimated at 15,000 tons.yr−1. The existing discrepancy between the flux data and the model for uMMs below 100 μm suggests that small fragile uMMs may evade present day collections, and/or that the amount of small interplanetary particles at 1 AU may be smaller than expected. |
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1120 |
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0012-821X |
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yes |
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8244 |
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Author |
Anika Immer, Thomas Merkling, Olivier Chastel, Scott A. Hatch, Etienne Danchin, Pierrick Blanchard, Sarah Leclaire |
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Title |
Spying on your neighbours? Social information affects timing of breeding and stress hormone levels in a colonial seabird |
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Journal |
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Year |
2021 |
Publication |
Evolutionary Ecology |
Abbreviated Journal |
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Volume |
35 |
Issue |
3 |
Pages |
463-481 |
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Abstract |
A good overlap between offspring energetic requirements and availability of resources is required for successful reproduction. Accordingly, individuals from numerous species fine-tune their timing of breeding by integrating cues that predict environmental conditions during the offspring period. Besides acquiring information from their direct interaction with the environment (personal information), individuals can integrate information by observing the behaviours or performance of others (social information). The use of social information is often beneficial because the accumulated knowledge of conspecifics may represent a source of information more reliable than the intrinsically more limited personal information. However, although social information constitutes the major source of information in a wide range of contexts, studies investigating its use in the context of timing of breeding are scarce. We investigated whether black-legged kittiwakes (Rissa tridactyla) used social information to adjust the timing of egg-laying. We manipulated social information using a food-supplementation experiment, known to advance kittiwakes' reproductive phenology. We expected food-supplemented and unsupplemented pairs to delay and advance, respectively, their timing of laying when surrounded by a majority of neighbours from the opposite food-treatment. However, both unsupplemented and food-supplemented kittiwakes delayed egg-laying when surrounded by a higher proportion of neighbours from the opposite food-treatment. This result shows that kittiwakes use social information to time egg-laying, but that it is not used to match the seasonal peak of food availability. We suggest that when social and personal cues give contradictory environmental information, individuals may benefit from delaying laying to gather more information to make better decisions about investment into eggs. Further, we explored a potential proximate mechanism for the pattern we report. We show that baseline corticosterone, known to mediate reproductive decisions, was lower in unsupplemented females facing a higher proportion of food-supplemented neighbours. Altogether, our results suggest that to fine-tune their timing of laying, kittiwakes use complex decision-making processes in which social and personal information interplay. |
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1162 |
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1573-8477 |
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1573-8477 |
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yes |
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8245 |
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Jesús A Ballesteros, Emily V W Setton, Carlos E Santibáñez-López, Claudia P Arango, Georg Brenneis, Saskia Brix, Kevin F Corbett, Esperanza Cano-Sánchez, Merai Dandouch, Geoffrey F Dilly, Marc P Eleaume, Guilherme Gainett, Cyril Gallut, Sean McAtee, Lauren McIntyre, Amy L Moran, Randy Moran, Pablo J López-González, Gerhard Scholtz, Clay Williamson, H Arthur Woods, Jakob T Zehms, Ward C Wheeler, Prashant P Sharma |
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Title |
Phylogenomic Resolution of Sea Spider Diversification through Integration of Multiple Data Classes |
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Journal |
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Year |
2021 |
Publication |
Molecular Biology and Evolution |
Abbreviated Journal |
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Volume |
38 |
Issue |
2 |
Pages |
686-701 |
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Keywords |
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Abstract |
Despite significant advances in invertebrate phylogenomics over the past decade, the higher-level phylogeny of Pycnogonida (sea spiders) remains elusive. Due to the inaccessibility of some small-bodied lineages, few phylogenetic studies have sampled all sea spider families. Previous efforts based on a handful of genes have yielded unstable tree topologies. Here, we inferred the relationships of 89 sea spider species using targeted capture of the mitochondrial genome, 56 conserved exons, 101 ultraconserved elements, and 3 nuclear ribosomal genes. We inferred molecular divergence times by integrating morphological data for fossil species to calibrate 15 nodes in the arthropod tree of life. This integration of data classes resolved the basal topology of sea spiders with high support. The enigmatic family Austrodecidae was resolved as the sister group to the remaining Pycnogonida and the small-bodied family Rhynchothoracidae as the sister group of the robust-bodied family Pycnogonidae. Molecular divergence time estimation recovered a basal divergence of crown group sea spiders in the Ordovician. Comparison of diversification dynamics with other marine invertebrate taxa that originated in the Paleozoic suggests that sea spiders and some crustacean groups exhibit resilience to mass extinction episodes, relative to mollusk and echinoderm lineages. |
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1124 |
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1537-1719 |
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yes |
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Serial |
8246 |
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Francesco Enrichi, Dorthe Dahl-Jensen, Jørgen Peder Steffensen, Carlo Barbante |
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Title |
Theoretical and Experimental Analysis for Cleaning Ice Cores from EstisolTM 140 Drill Liquid |
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Journal |
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Year |
2021 |
Publication |
Applied Sciences |
Abbreviated Journal |
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Volume |
11 |
Issue |
9 |
Pages |
3830 |
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Keywords |
Beyond EPICA drilling Estisol ice cores |
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Abstract |
To reconstruct climate history of the past 1.5 Million years, the project: Beyond EPICA Oldest Ice (BEOI) will drill about 2700 m of ice core in East Antarctica (2021–2025). As drilling fluid, an aliphatic ester fluid, EstisolTM 140, will be used. Newly drilled ice cores will be retrieved from the drill soaked in fluid, and this fluid should be removed from the cores. Most of it will be vacuum-cleaned off in a Fluid Extraction Device and wiped off with paper towels. Based on our experiences in Greenland deep ice coring, most of the residual fluid can be removed by storing the cores openly on shelves in a ventilated room. After a week of “drying”, the cores have a dry feel, handling them do not give “wet” gloves and they can easily be marked with lead pencils. This paper presents a theoretical investigation and some simple testing on the “drying” process. The rates of sublimation of ice and evaporation of fluid have been calculated at different temperatures. The calculations show that sublimation of the ice core should not occur, and that evaporation of fluid should be almost negligible. Our test results support these calculations, but also revealed significant fluid run-off and dripping, resulting in the removal of most of the fluid in a couple of days, independent of temperature and ventilation conditions. Finally, we discuss crucial factors that ensure optimal long-term ice core preservation in storage, such as temperature stability, defrosting cycles of freezers and open core storage versus storage of cores in insulated crates. |
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1202 |
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yes |
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8247 |
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Emilia Trudnowska, Léo Lacour, Mathieu Ardyna, Andreas Rogge, Jean Olivier Irisson, Anya M. Waite, Marcel Babin, Lars Stemmann |
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Title |
Marine snow morphology illuminates the evolution of phytoplankton blooms and determines their subsequent vertical export |
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Year |
2021 |
Publication |
Nature Communications |
Abbreviated Journal |
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Volume |
12 |
Issue |
1 |
Pages |
2816 |
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Keywords |
Carbon cycle Marine biology |
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Abstract |
The organic carbon produced in the ocean’s surface by phytoplankton is either passed through the food web or exported to the ocean interior as marine snow. The rate and efficiency of such vertical export strongly depend on the size, structure and shape of individual particles, but apart from size, other morphological properties are still not quantitatively monitored. With the growing number of in situ imaging technologies, there is now a great possibility to analyze the morphology of individual marine snow. Thus, automated methods for their classification are urgently needed. Consequently, here we present a simple, objective categorization method of marine snow into a few ecologically meaningful functional morphotypes using field data from successive phases of the Arctic phytoplankton bloom. The proposed approach is a promising tool for future studies aiming to integrate the diversity, composition and morphology of marine snow into our understanding of the biological carbon pump. |
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1164 |
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ISSN |
2041-1723 |
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yes |
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Serial |
8250 |
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Author |
Natasha Roy, James Woollett, Najat Bhiry, Isabel Lemus-Lauzon, Ann Delwaide, Dominique Marguerie |
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Title |
Anthropogenic and climate impacts on subarctic forests in the Nain region, Nunatsiavut: Dendroecological and historical approaches |
Type |
Journal |
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Year |
2021 |
Publication |
Écoscience |
Abbreviated Journal |
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Volume |
28 |
Issue |
3-4 |
Pages |
361-376 |
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Keywords |
approches historiques croissance démographique Dendrochronologie Dendrochronology détente de croissance radiale growth release historical approaches Nain Nunatsiavut population growth |
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Abstract |
Several recent dendrochronological, macrofossil and palynological studies have surveyed modern spruce forests at multiple locations in the Nain region of coastal Nunatsiavut (north-central Labrador) in order to reconstruct past forest composition, growth rates, species diversity and harvesting patterns. The present paper synthesizes original and previously collected data to evaluate the extent to which the dynamics of the region’s spruce forests over the past five centuries have been related to anthropogenic impacts. In three key case studies, Picea growth release events demonstrate multiple isolated forest disturbances prior to the late 19th century. In general, these events correspond to the local human settlement history rather than to regional climatic trends, suggesting that ongoing human impacts on the forest extend as far back as the 17th century. Disturbance regimes accelerated by ca 1875 and afterward in all of the study sites. This increase in forest disturbance corresponds to increased demands for wood triggered by socio-economic changes experienced by the region’s Inuit and Settler communities. Ongoing surveys demonstrate the presence of markers of human exploitation of forests throughout the study region, and especially in coastal locations, suggesting that anthropogenic impacts are in fact generalised and not limited to specific areas of recent settlement. |
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Programme |
1080 |
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Campaign |
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Address |
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Corporate Author |
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Thesis |
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Publisher |
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Place of Publication |
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Editor |
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Language |
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Summary Language |
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Original Title |
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Series Editor |
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Series Title |
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Abbreviated Series Title |
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Series Volume |
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Series Issue |
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Edition |
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ISSN |
1195-6860 |
ISBN |
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Medium |
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Area |
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Expedition |
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Conference |
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Notes |
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Approved |
yes |
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Call Number |
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Serial |
8251 |
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