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Author |
Vinokhodova A.G., Bystritskaya A.F., Rosnet E. & Cazes G. |
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Title |
Some features of group interaction and individual behaviour under the conditions of prolonged small group isolation. |
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Journal Article |
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Year |
1997 |
Publication |
Aerospace and environmental medicine (russia) |
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31 |
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4 |
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20-23 |
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252 |
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yes |
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493 |
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Author |
Vincke S., Van de Vijver B., Ledeganck P., Nijs I. & Beyens L. |
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Title |
Testacean communities in perturbed soils: the influence of the wandering albatross |
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Journal Article |
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Year |
2007 |
Publication |
POLAR BIOLOGY |
Abbreviated Journal |
Polar Biol. |
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Volume |
30 |
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Pages |
395-406 |
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136 |
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0722-4060 |
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yes |
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Serial |
5920 |
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Author |
Vincke S., Ledeganck P., Neyens L. & Van de Vijver B. |
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Title |
Soil testate amoebae from sub-Antarctic Iles Crozet. |
Type |
Journal Article |
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Year |
2004 |
Publication |
Antarctic science |
Abbreviated Journal |
Antarct. Sci. |
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Volume |
16 |
Issue |
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Pages |
165-174 |
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136 |
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ISSN |
0954-1020 |
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yes |
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2434 |
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Vincent Zvenigorosky, Sylvie Duchesne, Patrice Gerard, Anatoly Alexeev, Nikolai Kirianov, Dariya Nikolaeva, Vassili Popov, Christiane Petit, Jean Guilaine, Sergei Kodolesnikov, Michel Petit, Liubomira Romanova, Alexandre Riberon, Annie Geraut, Catherine Cannet, Jean-Luc Fausser, Veronica Pereda, Olga Meniltchuk, Xavier Mata, Catherine Theves, Rozalia Bravina, Ludovic Orlando, Christine Keyser, Bertrand Ludes, Eric Crubezy |
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Title |
Relationships between clans and genetic kin explain cultural similarities over vast distances: the case of Yakutia |
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Journal |
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2017 |
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bioRxiv |
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168658 |
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Archaeological studies sample ancient human populations one site at a time, often limited to a fraction of the regions and periods occupied by a given group. While this bias is known and discussed in the literature, few model populations span areas as large and unforgiving as the Yakuts of Eastern Siberia. We systematically surveyed 31,000 square kilometres in the Sakha Republic (Yakutia) and completed the archaeological study of 174 frozen graves, assembled between the 15th and the 19th century. We analysed genetic data (autosomal genotypes, Y-chromosome haplotypes and mitochondrial haplotypes) for all ancient subjects and confronted it to the study of 190 modern subjects from the same area and the same population. Ancient familial links and paternal clan were identified between graves up to 1500 km apart and we provide new data concerning the origins of the contemporary Yakut population and demonstrate that cultural similarities in the past were linked to (i) the expansion of specific paternal clans, (ii) preferential marriage among the elites and (iii) funeral choices that could constitute a bias in any ancient population study. |
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1038 |
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yes |
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7015 |
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Title |
The genetic legacy of legendary and historical Siberian chieftains |
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Journal |
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Year |
2020 |
Publication |
Communications Biology |
Abbreviated Journal |
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Volume |
3 |
Issue |
1 |
Pages |
1-9 |
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Abstract |
Seventeen years of archaeological and anthropological expeditions in North-Eastern Siberia (in the Sakha Republic, Yakutia) have permitted the genetic analysis of 150 ancient (15th-19th century) and 510 modern individuals. Almost all males were successfully analysed (Y-STR) and this allowed us to identify paternal lineages and their geographical expansion through time. This genetic data was confronted with mythological, historical and material evidence to establish the sequence of events that built the modern Yakut genetic diversity. We show that the ancient Yakuts recovered from this large collection of graves are not representative of an ancient population. Uncommonly, we were also able to demonstrate that the funerary preference observed here involved three specific male lineages, especially in the 18th century. Moreover, this dominance was likely caused by the Russian conquest of Siberia which allowed some male clans to rise to new levels of power. Finally, we give indications that some mythical and historical figures might have been the actors of those genetic changes. These results help us reconsider the genetic dynamics of colonization in some regions, question the distinction between fact and myth in national histories and provide a rare insight into a funerary ensemble by revealing the biased process of its composition. |
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Programme |
1038 |
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Thesis |
Bachelor's thesis |
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ISSN |
2399-3642 |
ISBN |
2399-3642 |
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Notes |
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Approved |
yes |
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Call Number |
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Serial |
7790 |
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Author |
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Title |
The genetics of kinship in remote human groups |
Type |
Journal |
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Year |
2016 |
Publication |
Forensic Science International: Genetics |
Abbreviated Journal |
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Volume |
25 |
Issue |
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Pages |
52-62 |
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Keywords |
Ancient DNA Genetic kinship Population genetics Short tandem repeats Yakutia |
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Abstract |
For fifteen years, part of the work of our research team has been focused on the study of parental links between individuals living hundreds or thousands of years ago, whose remains have been found in single graves or large funerary complexes. These studies have been undertaken using methods developed by forensic genetics to identify individuals, mainly based on the genotyping of autosomal STR (Short Tandem Repeats). Issues arose from this work, namely the limits of studying small numbers of subjects, originating from groups of finite sizes where kinships cannot be inferred a priori and for which reference allelic frequencies do not exist. Although ideal human populations are rare when undertaking such studies, the Yakuts of Eastern Siberia constitute a very advantageous model, with large numbers of small pastoral communities and well-preserved archaeological material. The study of kinship in the ancient Yakuts allowed us to highlight the difficulties in analysing genetic data from small ancient human groups and to develop a strategy to improve the accuracy of statistical computations. This work describes this strategy and possible solutions to the study of populations outside of the frame of reference of global meta-populations, due either to isolation, remoteness or antiquity. |
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1038 |
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ISSN |
1872-4973 |
ISBN |
1872-4973 |
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yes |
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Call Number |
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Serial |
6913 |
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Author |
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Title |
Persistence and Disappearance of Traditional Patrilocality: Matrimonial Strategies and Postnuptial Residence Patterns in Two Eastern Siberian Communities of the Twenty-First Century |
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Journal |
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Year |
2019 |
Publication |
Sibirica |
Abbreviated Journal |
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Volume |
18 |
Issue |
1 |
Pages |
53-70 |
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This article describes current matrimonial strategies and residence patterns in two communities in the Sakha Republic. In Tolon, a rural settlement in central Sakha, community exogamy is predominant and patrilocality is detectable in postnuptial residence patterns. In the sub-Arctic town of Khonuu no gendered residence patterns are observed. Khonuu has an airport and serves as a regional capital. In Khonuu matrimonial decisions follow the immigration of men and couples rather than traditional strategies connected with horse- and cattle-based subsistence. This article discusses the possible biological, historical, and cultural reasons that explain the observance or lack of observance of traditional marriage in the contemporary Sakha Republic. |
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1038 |
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Bachelor's thesis |
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1476-6787, 1361-7362 |
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yes |
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Call Number |
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Serial |
7530 |
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Author |
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Title |
The limitations of kinship determinations using STR data in ill-defined populations |
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Journal |
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Year |
2020 |
Publication |
International Journal of Legal Medicine |
Abbreviated Journal |
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Volume |
134 |
Issue |
6 |
Pages |
1981-1990 |
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Abstract |
The likelihood ratio (LR) method is commonly used to determine kinship in civil, criminal, or forensic cases. For the past 15 years, our research group has also applied LR to ancient STR data and obtained kinship results for collections of graves or necropolises. Although we were able to reconstruct large genealogies, some pairs of individuals showed ambiguous results. Second-degree relationships, half-sibling pairs for example, were often inconsistent with detected first-degree relationships, such as parent/child or brother/sister pairs. We therefore set about providing empirical estimations of the error rates for the LR method in living populations with STR allelic diversities comparable to that of the ancient populations we had previously studied. We collected biological samples in the field in North-Eastern Siberia and West Africa and studied more than 800 pairs of STR profiles from individuals with known relationships. Because commercial STR panels were constructed for specific regions (namely Europe and North America), their allelic makeup showed a significant deficit in diversity when compared to European populations, replicating a situation often faced in ancient DNA studies. We assessed the capacity of the LR method to confirm known relationships (effectiveness) and its capacity to detect those relationships (reliability). Concerns over the effectiveness of LR determinations are mostly an issue in forensic studies, while the reliability of the detection of kinship is an issue for the study of necropolises or other large gatherings of unidentified individuals, such as disaster victims or mass graves. We show that the application of LR to both test populations highlights specific issues (both false positives and false negatives) that prevent the confirmation of second-degree kinship or even full siblingship in small populations. Up to 29% of detected full sibling relationships were either overestimated half-sibling relationships or underestimated parent-offspring relationships. The error rate for detected half-sibling relationships was even higher, reaching 41%. Only parent-offspring pairs were reliably detected or confirmed. This implies that, in populations that are small, ill-defined, or for which the STR loci analyzed are inappropriate, an examiner might not be able to distinguish a pair of full siblings from a pair of half-siblings. Furthermore, half-sibling pairs might be overlooked altogether, an issue that is exacerbated by the common confusion, in many languages and cultures, between half-siblings and full siblings. Consequently, in the study of ancient populations, human remains of unknown origins, or poorly surveyed modern populations, we recommend a conservative approach to kinship determined by LR. Next-generation sequencing data should be used when possible, but the costs and technology involved might be prohibitive. Therefore, in potentially contentious situations or cases lacking sufficient external information, uniparental markers should be analyzed: ideally, complete mitochondrial genomes and Y-chromosome haplotypes (STR, SNP, and/or sequencing). |
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1038 |
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ISSN |
1437-1596 |
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yes |
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8059 |
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Title |
Numerical Weather Forecasts at Kilometer Scale in the French Alps: Evaluation and Application for Snowpack Modeling |
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Journal |
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Year |
2016 |
Publication |
Journal of Hydrometeorology |
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Volume |
17 |
Issue |
10 |
Pages |
2591-2614 |
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411 |
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1525-7541, 1525-755X |
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yes |
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8287 |
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Author |
Vincent Lesur, Aude Chambodut |
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Title |
The French network of magnetic observatories |
Type |
Communication |
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Year |
2020 |
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139 |
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yes |
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7095 |
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